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The example code below shows how to write version 7.3 MAT files directly from C++ using the HDF5 library (libhdf5) and HighFive, a header-only C++ wrapper for libhdf5. Version 7.3 MAT files are HDF5-based, but contain a proprietary header in the first 512 bytes of the file.
The implementation performs three primary tasks:
First, it creates an HDF5 file with a 512-byte userblock. After data has been added into the file, the file is closed. Then a 128-byte header is written into the userblock so that the file is recognized by MATLAB as a valid version-7.3 MAT file. This is done in function makeMatHeader.
Second, MATLAB-specific metadata attributes are added to each dataset. Attributes such as MATLAB_class and MATLAB_int_decode inform MATLAB how each dataset should be interpreted.
Third, MATLAB-compatible complex datasets are created by overriding HighFive's default complex-number layout. HighFive uses the field names `r` and `i` by default, while MATLAB expects `real` and `imag`. A Highfive custom compound type is therefore registered for `std::complex<double>` using the MATLAB field names.
With these changes in place, C++ code can write scalar values, vectors, structs, complex arrays, and character arrays to a file that MATLAB can read as a version 7.3 MAT file.
#include <iostream>
#include <vector>
#include <complex>
#include <cstddef>
#include <fstream>
#include <string>
#include <cstdint>
#include <utility>
#include <bitset>
#include <highfive/highfive.hpp>
#include "hdf5.h"
// Modify the 512-byte userblock at the front of the HDF5 file to make it compatible with MATLAB's v7.3 MAT file format.
void makeMatHeader(std::string filename)
{
char header[512]; // MATLAB-style header for HDF5 file
memset(header, 0, sizeof(header)); // Initialize header to all zeros
// Example header content
snprintf(header, sizeof(header), "MATLAB 7.3 MAT-file, Platform: HDF5");
header[124] = 0;
header[125] = 2;
// I/M indicate little-endian format (Intel Mac/Windows)
header[126] = 'I';
header[127] = 'M';
// Write the header to the beginning of the file
std::ofstream outFile(filename, std::ios::binary | std::ios::in | std::ios::out);
outFile.seekp(0);
outFile.write(header, sizeof(header));
outFile.close();
}
// https://www.geeksforgeeks.org/dsa/inplace-m-x-n-size-matrix-transpose/
void MatrixInplaceTranspose(int *A, int rows, int cols)
{
// Moves elements in-place to achieve the transpose.
// A is a pointer to a 2D array, rows is the number of rows, and cols is the number of columns.
int size = rows*cols - 1;
int t; // holds element to be replaced, eventually becomes next element to move
int next; // location of 't' to be moved
int cycleBegin; // holds start of cycle
int i; // iterator
const int HASH_SIZE = 8192; // define a suitable hash size for the bitset. Must be at least as large as the number of elements in the matrix.
std::bitset<HASH_SIZE> b; // hash to mark moved elements. Must be large enough to cover all indices.
if (rows <= 0 || cols <= 0) {
throw std::invalid_argument("Matrix dimensions must be positive");
}
else if ((rows * cols) > HASH_SIZE)
{
throw std::invalid_argument("Matrix size exceeds hash size for in-place transpose. Increase the HASH_SIZE constant.");
}
b.reset();
b[0] = b[size] = 1;
i = 1; // Note that A[0] and A[size-1] won't move
while (i < size)
{
cycleBegin = i;
t = A[i];
do
{
// Input matrix [rows x cols]
// Output matrix [cols x rows]
// i_new = (i*rows)%(N-1)
next = (i*rows)%size;
std::swap(A[next], t);
b[i] = 1;
i = next;
}
while (i != cycleBegin);
// Get Next Move (what about querying random location?)
for (i = 1; (i < size) && b[i]; i++)
;
}
}
template <typename T>
std::vector<std::vector<T>> transpose(const std::vector<std::vector<T>>& matrix)
{
// Performs a nonconjugate transpose on a vector of vectors
// The input matrix is a vector of vectors, where each inner vector represents a row of the matrix.
// Handle empty matrix edge case
if (matrix.empty() || matrix[0].empty()) {
return {};
}
size_t rows = matrix.size();
size_t cols = matrix[0].size();
// Initialize the transposed matrix with flipped dimensions: cols x rows
std::vector<std::vector<T>> transposed(cols, std::vector<T>(rows));
for (size_t i = 0; i < rows; ++i) {
for (size_t j = 0; j < cols; ++j) {
transposed[j][i] = matrix[i][j];
}
}
return transposed;
}
// Creates a HighFive compound type for representing MATLAB-style complex numbers
// HighFive by default uses r/i but that is not compatible with MATLAB's complex number representation, which uses real/imag.
HighFive::CompoundType matlabComplexDouble () {
return {
{"real", HighFive::AtomicType<double>{}},
{"imag", HighFive::AtomicType<double>{}}
};
}
// Register the CompoundType to represent std::complex<double>
HIGHFIVE_REGISTER_TYPE(std::complex<double>, matlabComplexDouble);
int main()
{
const std::string filename = "test.mat";
// Needed for the complex number literal suffix 'i'
using namespace std::literals;
/*
* MATLAB vs C++ array layout
*
* MATLAB stores arrays in column-major order, meaning values in the same column are
* laid out next to each other in memory. Typical C++ containers such as nested std::vector and arrays
* are written in row-major order, where values in the same row are adjacent in memory.
*
* That difference matters when something such as a 2D dataset is exchanged from C++ to MATLAB. A 2x3
* matrix written from C++ in row-major order will be interpreted by MATLAB as a 3x2 matrix, transposed relative
* to the original C++ layout. The user will have to transpose the array to view the original C++ layout
* correctly.
*
* C++ developers need to be aware of the memory layout when
* exchanging multidimensional arrays with MATLAB. To maintain the structure,
* one will need to transpose the array before writing it to the mat file.
*/
// Test data
// 2x3 Array of complex double
std::vector<std::vector<std::complex<double>>> dataComplex = {{10.0 + 1.0i, 20.0 + 2.0i, 30.0 + 3.0i},
{40.0 + 4.0i, 50.0 + 5.0i, 60.0 + 6.0i}};
// 1x3 Vector of double
std::vector<double> dataDoubleVec = {1.1, 2.2, 3.3};
// 1x5 Array of integers
int dataIntArray[5] = {1, 2, 3, 4, 5};
// 2x4 Array of integers
int dataIntArray2x4[2][4] = {{1, 2, 3, 4},
{5, 6, 7, 8}};
int dataInt = 79;
double dataDouble = 3.14;
std::string dataString = "Hello, MATLAB!!!!!";
{
// Put the highfive related code into its own block so that the file gets closed when the file object is no longer in scope.
// Create a highfive file create property, get the underlying HDF5 property ID, and set a userblock size
HighFive::FileCreateProps fcp = HighFive::FileCreateProps::Empty();
hid_t fcpl_id = fcp.getId();
H5Pset_userblock(fcpl_id, 512);
HighFive::File file(filename, HighFive::File::Truncate, fcp);
// Storing a double to the file
// For something that is only a single value, must create a 1x1 dataspace
HighFive::DataSpace scalarDoubleSpace({1, 1});
// This creates a variable in the MATLAB workspace with the name "double_value"
HighFive::DataSet doubleField = file.createDataSet<double>("double_value", scalarDoubleSpace);
doubleField.write(dataDouble);
// Metadata for MATLAB compatibility
doubleField.createAttribute("MATLAB_class", std::string("double"));
// Storing an integer to the file
// For something that is only a single value, must create a 1x1 dataspace
HighFive::DataSpace scalarIntSpace({1, 1});
// This creates a variable in the MATLAB workspace with the name "int_value"
HighFive::DataSet intField = file.createDataSet<int>("int_value", scalarIntSpace);
intField.write(dataInt);
// Metadata for MATLAB compatibility
intField.createAttribute("MATLAB_class", std::string("int32"));
// Storing a C-style 1x5 array of integers to the file
// Since it is a single dimension, there is no need to move the data, just reinterpret it as a 5x1 row-major array.
// When Matlab imports it, it will perceive it as a 1x5 column-major array.
// This line casts the 1x5 array to a 5x1 array to match MATLAB's column-major order
int (*numArrayTrans5x1)[1] = reinterpret_cast<int (*)[1]>(dataIntArray);
HighFive::DataSpace intArray5x1Space({5, 1});
// This creates a variable in the MATLAB workspace with the name "int_array"
HighFive::DataSet intArrayField = file.createDataSet<int>("int_array", intArray5x1Space);
intArrayField.write(numArrayTrans5x1);
intArrayField.createAttribute("MATLAB_class", std::string("int32"));
// Storing a C-style 2x4 array of integers to the file
// For something that is a multi-dimensional array, we need to transpose the array and create a dataspace with the dimensions swapped
// so that the data is stored in column-major order.
MatrixInplaceTranspose((int*)dataIntArray2x4, 2, 4);
// After moving the values around, we need to cast the array with the new dimensions to match the new layout
// Cast the transposed 2x4 array to a 4x2 array to match MATLAB's column-major order
int (*numArrayTrans)[2] = reinterpret_cast<int (*)[2]>(dataIntArray2x4);
HighFive::DataSpace intArray2x4Space({4, 2});
// This creates a variable in the MATLAB workspace with the name "int_array_2x4"
HighFive::DataSet intArray2x4Field = file.createDataSet<int>("int_array_2x4", intArray2x4Space);
intArray2x4Field.write(numArrayTrans);
intArray2x4Field.createAttribute("MATLAB_class", std::string("int32"));
// Creating a Matlab struct (HDF5 group)
HighFive::Group my_struct = file.createGroup("my_struct");
my_struct.createAttribute("MATLAB_class", std::string("struct"));
// The only difference between storing data into a struct or as a normal variable in the MAT file is the
// the parent object you use when you do "createDataSet".
// file.createDataSet would create a normal variable, my_struct.createDataSet creates it within the "my_struct" struct.
// Storing a string to the struct so that it will be accessible as a character array in MATLAB
// For something that is a string, we create a dataspace with dimensions [string_length, 1] and save the character data accordingly
// We create a vector that has dataString.size() elements, each of which is a char vector of size 1 to store individual characters.
std::vector<std::vector<char>> text_bytes(dataString.size(), std::vector<char>(1));
// MATLAB expects character arrays to be a row vector so we reshape it accordingly since dimensions are swapped between C++ and MATLAB
for (int i = 0; i < dataString.size(); ++i) {
text_bytes[i][0] = dataString[i];
}
HighFive::DataSpace charSpace({dataString.size(), 1});
// uint16_t is required for MATLAB character arrays
HighFive::DataSet textField = my_struct.createDataSet<uint16_t>("text_value", charSpace);
textField.write(text_bytes);
// Metadata for MATLAB compatibility
textField.createAttribute("MATLAB_class", std::string("char"));
// Tell MATLAB to interpret the data as characters rather than integers
textField.createAttribute("MATLAB_int_decode", 2);
// Storing a vector to the struct
// In order to transpose the vector correctly, we first wrap it in another vector to make it a 2D array.
std::vector<std::vector<double>> transposableDoubleVec = { dataDoubleVec };
// For vectors, we let HighFive infer the dataspace from the data itself
// Transpose the vector to match MATLAB's column-major order
HighFive::DataSet doubleVectorField = my_struct.createDataSet("double_vector", transpose(transposableDoubleVec));
// Metadata for MATLAB compatibility
doubleVectorField.createAttribute("MATLAB_class", std::string("double"));
// Storing a complex (and multi-dimensional) vector to the struct
// For multi-dimensional vectors, we need to perform a noncojugate transpose on the array to match
// MATLAB's column-major order so the data layout is consistent between C++ and MATLAB.
// For vectors, we let HighFive infer the dataspace from the data itself
HighFive::DataSet complexField = my_struct.createDataSet("complex_vector", transpose(dataComplex));
// Metadata for MATLAB compatibility
complexField.createAttribute("MATLAB_class", std::string("complex"));
}
// Finalize the MATLAB-compatible HDF5 file by writing the MATLAB header into the userblock
makeMatHeader(filename);
return 0;
}
When I embed Matlab windows into C#, I use C# to call the mouse functions such as drawline() and getpts() which are encapsulated in Matlab's dll, and then the program crashes, how can I solve this problem?
ps : The functions that I call in C# can be executed in Matlab.
ps : If I don't embed the window into C#, but just let C# call the Matlab function, it can execute the mouse control normally in the window, but once embedded into the C# window, it will crash when execute the mouse command.

can you tell how c2000_host_read_12M.slx is working and subsystems of it. its not discussed in the video morever how you ran the model f28379 in ccs and host in normal.? can you explain like step by step i tried same but got error n error occurred while running the simulation and the simulation was terminated Caused by: Error evaluating registered method 'Outputs' of MATLAB S-Function 'sserialsb' in 'online_tun/Serial Send/Serial Send'. FWRITE cannot be called. The FlowControl property is set to 'hardware' and the Clear To Send (CTS) pin is low. This could indicate that the serial device may not be turned on, may not be connected, or does not use hardware handshaking.