Resources

Take full advantage of MATLAB for neuroscience with tutorials, toolboxes, third-party products, and other resources

Electrophysiology

Use MATLAB tools to explore and analyze neural time-series data

Time-Varying Coherence: Reveal Time-Varying Patterns Common in Two Signals

This example shows how to use wavelet coherence to look for time-localized coherent oscillatory behavior. It uses two NIRS time series from a pair of interacting subjects.

Tools for EEG, MEG, and ECoG Data - File Exchange
Tools for Cellular Electrophysiology Data - File Exchange
EEG Hardware - Third-Party Product Directory
Analyzing Neural Time Series Data: Theory and Practice - Book
Case Studies in Neural Data Analysis - Book

Related Products: Signal Processing Toolbox, Wavelet Toolbox

Neuroimaging and Microscopy

Use MATLAB tools to visualize and analyze structural and functional image datasets

3D Image Segmentation of Brain Tumors Using Deep Learning

This video shows 3D image processing and visualization as part of training a 3D deep neural network to perform semantic segmentation of brain tumors from MRI data.

Statistical Parametric Mapping (SPM): Software for the Analysis of Brain Imaging Data Sequences - File Exchange
Tools for Brain MRI Data - File Exchange
Tools for Microscopy Data - File Exchange
Examples Using MRI Data - Examples
3D Volumetric Image Processing - Documentation
NIfTI File Format for Neuroscience Image Volumes - Documentation

Neural Data Science

Use MATLAB to analyze neuroscience data, draw statistical inferences, and build predictive models based on neuroscience data

3D Brain Tumor Segmentation Using Deep Learning

This example illustrates the use of a 3D convolutional neural network (CNN) for brain tumor detection based on pixel-wise semantic segmentation.

Seizure Prediction from EEG Data - File Exchange
Tools for Neuroinformatics - File Exchange
Neuroinformatics Service Providers - Third-Party Product Directory
MATLAB for Brain and Cognitive Scientists - Book
Case Studies in Neural Data Analysis - Book

Experiment Control

Use MATLAB and Simulink to acquire neural and behavioral data and to run neuroscience experiments

Automated Control of Cellular Neuroscience Experiments with Image Processing

Fully Automated Cell-Targeted Patch-Clamping In Vivo

This article illustrates how Data Acquisition Toolbox, community toolboxes, and third-party products were used to automate a complex experiment.

Psychophysics Toolbox - File Exchange
Neuroscience Hardware - Third-Party Product Directory
BCI Teaching-Lab: Brain-Computer Interface for Teaching and Research Labs - Third-Party Product