MRI Image alignment, help!

조회 수: 2 (최근 30일)
Rafael Tinajero Ayala G.A
Rafael Tinajero Ayala G.A 2019년 9월 24일
댓글: Rik 2019년 9월 24일
Hello matlab community, Im currently working on a matlab project of MRS voxel segmentation. Currently Im starting to load the anatomical volume and display the three planes. I need to align my image to the coordenates of the scanner, to later obtain the Volume of Interest, which is referenced to the isocenter. I´ve have only found 'ImagePositionPatient' and 'Slice thickness'. Do you know algorithms to align the volume to the coordenates of the MRI Scanner.
  댓글 수: 1
Rik
Rik 2019년 9월 24일
With MRI you also need to account for the orientation of the slices relative to the scanner coordinate system. 6 of the 9 elements of the direct cosine transform should be encoded in the dicom header, if I recall correctly. You are also forgetting that slices don't need to be contiguous; they can overlap (as is common in CT), or have gaps between them (which is common in MRI). The SliceIncrement descibes the distance between the start of consecutive slices, so it is probably what you are actually looking for. SliceIncrement is not a required dicom tag, but is often present.

댓글을 달려면 로그인하십시오.

답변 (0개)

카테고리

Help CenterFile Exchange에서 DICOM Format에 대해 자세히 알아보기

태그

Community Treasure Hunt

Find the treasures in MATLAB Central and discover how the community can help you!

Start Hunting!

Translated by