MATLAB giving error while trying to create a 3D scatter plot: Error using sparse (Index exceeds array bounds)

조회 수: 3 (최근 30일)
I was following the MathWorks example: https://www.mathworks.com/help/stats/tsne.html#bvkcm24-1 which works fine for fisheriris dataset.
load fisheriris
[Y2,loss2] = tsne(meas,'Algorithm','exact','NumDimensions',3);
figure
v = double(categorical(species));
c = full(sparse(1:numel(v),v,ones(size(v)),numel(v),3));
scatter3(Y2(:,1),Y2(:,2),Y2(:,3),15,c,'filled')
title('3-D Embedding')
view(-50,8)
However, when I change a dataset to something else, it gives error:
Error using sparse
Index exceeds array bounds.
I have the following:
c = full(sparse(1:numel(v), v, ones(size(v)), numel(v), 3));
where numel(v) = 9339, size(v) = 9339 x 1 double
Here the last argument is digit '3' which I followed from MathWorks example in link above. I want to reduce it to 3 dimensions and create a 3D plot same as in that example.
In my case v has 25 classes unlike 3 in Mathworks exaple. So I changed it as follows:
c = full(sparse(1:numel(v), v, ones(size(v)), numel(v), 25));
This time there is no error in c, but I get the error below:
Error using scatter3 (line 109)
C must be a single color, a vector the same length as X, or an M-by-3 matrix.
  댓글 수: 10
hello_world
hello_world 2018년 7월 18일
편집: hello_world 2018년 7월 18일
@Walter Roberson:
Understand everything, but how to create colormap array to be used in question (2) & (3) above?
I am closing. If you put your reply as an answer instead of a comment, I can accept it.
Walter Roberson
Walter Roberson 2018년 7월 18일
I would prefer you did not close the question, as it might be of use to other people.
To create a colormap array, just assign to it.
mycmap = [0 0 1;
0 0 .5;
0 0 0;
0 .5 0;
0 .5 .5;
0 .5 1;
0 1 1;
0.5 1 1;
0.5 1 0.5;
0.5 1 0;
0.5 0.5 0;
0.5 0 0 ];
colormap(mycmap)

댓글을 달려면 로그인하십시오.

채택된 답변

Walter Roberson
Walter Roberson 2018년 7월 18일
Copying from comments:
scatter3(Y2(:,1), Y2(:,2), Y2(:,3), 15, v(:), 'filled');
colormap( jet(numel(unique(v))) )

추가 답변 (0개)

카테고리

Help CenterFile Exchange에서 Sparse Matrices에 대해 자세히 알아보기

Community Treasure Hunt

Find the treasures in MATLAB Central and discover how the community can help you!

Start Hunting!

Translated by