how to segment trus prostate image?
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Hi. I am trying to segment the prostate from TRUS image. This is what I have so far (see attachment). Does anyone know how to :
- remove the unrelated object (ie. the white curve on top of prostate in last figure)
- outline/connect the white pixel to form the prostate boundary?
This is the code:
clc;
clear;
close all;
i=imread('trus1.jpg');
i=im2uint8(rgb2gray(i));
[m,n]=size(i);
I=imresize(i,[2*m,2*n]);
figure, imshow(I), title('original image');
[~, threshold] = edge(I, 'sobel');
fudgeFactor = .5;
BWs = edge(I,'sobel', threshold * fudgeFactor);
figure, imshow(BWs), title('binary gradient mask');
se90 = strel('line', 3, 90);
se0 = strel('line', 3, 0);
BWsdil = imdilate(BWs, [se90 se0]);
figure, imshow(BWsdil), title('dilated gradient mask');
BWdfill = imfill(BWsdil,'holes');
figure, imshow(BWdfill);
title('binary image with filled holes');
BWnobord = imclearborder(BWdfill,6);
figure, imshow(BWnobord), title('cleared border image');
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Image Analyst
2017년 8월 25일
THere is nothing built in to do that so you'll have to search the literature to see if anyone has done that before. Try PubMed, or VisBib.
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