Pulse generator issue with memory blocks

Hello, I seem to have an issue with a pulse generator.

Pulse1 -> SubSystem -> Pulse2 ->[triggers subsystem2] ->Matlab function block (general signal flow)

as you can see below the parameters of the pulses are the same, but when I measure them they are not... any ideas? (subsystem1 is not triggered)

I also have a few memory blocks from the triggered sub system and if I remove these the problem goes away (but I need them)

Here is a look at subsystem1

The measurments are taken at 'Trigger' and 'Pulse generator2' , you cant see it but 'Trigger' is fed by pulse generator1 outside the subsystem.