To create an array non rectangular, and replace -9.99e+08 by NaN

With an ascii file like this, i should create an array without char and replace -9.99e+08 by NaN. I have tried to use fscaf, importdata, fopen, fgetl, textscan, with no luck. Data is about 2700x120
DAY 1
hora
2.94661,2.8992,2.83784,2.75326,2.64293,2.502,2.33672,2.15181,1.97694,1.62358,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,0.00668253,0.0327668,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,0.382449,0.634328,0.756799,2.02886,2.02872,2.0448,2.08052,2.13473,2.19808,2.26112,2.32166,2.38032,2.43497,2.49194,2.55233,2.61536,2.6884,2.75805,2.82604,2.89104,2.94754,2.99919,3.04897,3.09346,3.12746,3.15073,3.17229,3.18993,3.21008,3.21896,3.21751,3.21407,3.2092,3.19818,3.17865,3.15254,3.12281,3.09062,3.05499,
DAY 1
hora
3.01386,2.95982,2.89613,2.79949,2.66645,2.51039,2.31493,2.08688,1.88495,1.69834,1.21471,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,0.113704,0.686638,0.838769,1.94775,1.98941,2.01369,2.04883,2.10897,2.17141,2.23687,2.30698,2.36559,2.41933,2.47953,2.5397,2.61365,2.69031,2.76852,2.84643,2.91943,2.98375,3.04899,3.10675,3.15609,3.19145,3.22043,3.252,3.27625,3.30003,3.30994,3.30678,3.30493,3.29936,3.28458,3.25814,3.22225,3.1828,3.13889,
DAY 1
hora
3.09121,3.03496,2.95881,2.8708,2.70711,2.52024,2.28281,2.03823,1.78428,1.55195,1.22014,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,-9.99e+08,0.375232,1.83988,1.902,1.96085,2.01703,2.07893,2.14457,2.21195,2.27242,2.32602,2.38688,2.45014,2.5231,2.6051,2.68827,2.77123,2.85808,2.94469,3.02391,3.09252,3.15477,3.21066,3.25666,3.3011,3.34646,3.37945,3.40107,3.40978,3.41064,3.40967,3.39793,3.37444,3.33646,3.28961,3.23557,
. . .
clear all;
contador=1;
fid = fopen('ascii_file.txt');
tline = fgetl(fid);
while ischar(tline)
disp(tline)
tline = fgetl(fid);
if (tline ~= -1)
nums(contador,:) = sscanf(tline(:), [1, inf]);
end
contador = contador + 1;
end
fclose(fid);

댓글 수: 1

@Rapha alpha: can you please edit your question and upload a sample file using the paperclip button. This makes helping you much easier.

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답변 (1개)

Shameer Parmar
Shameer Parmar 2016년 6월 15일
Hello Rapha alpha,
Try for this code..
clear all;
contador=1;
fid = fopen('ascii_file.txt');
tline = fgetl(fid);
while ischar(tline)
disp(tline);
if (tline ~= -1)
if ~isempty(tline)
nums(contador,:) = {strrep(tline,'-9.99e+08','NaN')};
end
else
nums(contador,:) = {''};
end
contador = contador + 1;
tline = fgetl(fid);
end
fclose(fid);
fid = fopen('ascii_file.txt','w');
for i=1:length(nums)
fprintf(fid,'%s\n',nums{i});
end
fclose(fid);

카테고리

도움말 센터File Exchange에서 Genomics and Next Generation Sequencing에 대해 자세히 알아보기

질문:

2016년 6월 15일

답변:

2016년 6월 15일

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