GEO Platform Annotation Table Reader

버전 1.0.0.0 (1.72 KB) 작성자: Sisi Ma
reads and parses platform annotation table (*.annot) from GEO.
다운로드 수: 230
업데이트 날짜: 2013/8/20

라이선스 보기

This function reads and parses platform annotation table (*.annot) for NCBI Gene Expression Omnibus(GEO). Platform annotation table contain information about platforms.

Input:
filename: filename of the *.annot file
Output:
annotation: platform annotation info platform_table: platform table

Example:
1) obtain a *.annot file
e.g. from ftp://ftp.ncbi.nlm.nih.gov/geo/platforms/GPL2nnn/GPL2883/annot/GPL2883.annot.gz
unzip the file, you will get: GPL2883.annot
2) put the function and the annot file in your working directry, or addpath
3) run function
[annotation, platform_table]=read_annot_file('GPL2883.annot');

인용 양식

Sisi Ma (2025). GEO Platform Annotation Table Reader (https://kr.mathworks.com/matlabcentral/fileexchange/43153-geo-platform-annotation-table-reader), MATLAB Central File Exchange. 검색 날짜: .

MATLAB 릴리스 호환 정보
개발 환경: R2013a
모든 릴리스와 호환
플랫폼 호환성
Windows macOS Linux
카테고리
Help CenterMATLAB Answers에서 Genomics and Next Generation Sequencing에 대해 자세히 알아보기

Community Treasure Hunt

Find the treasures in MATLAB Central and discover how the community can help you!

Start Hunting!
버전 게시됨 릴리스 정보
1.0.0.0