help getting DNA seq from the fasta file when I have txt file with more than 70 coordinates

I need to input to matlab a list of DNA coordinates, from a txt file, and get matlab to take from each coordinate a rage of 70 bases and put it out from a fasta file, and I need to have each seq with is Id name that I also have in txt file.. It's my first time doing anything on matlab, hope some one could help me. by the way, if there's a more simple way to do this from excl files I made them into txt file to make is more simple but maybe I'm wrong. thank you!

답변 (1개)

Hi Noa,
The bioinformatics toolbox has the following commands
fastaread
fastawrite
If you do not have the Bioinformatics toolbox you can import data from an excel sheet with the following command
xlsread
Hope this points you in the right direction to get started.

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도움말 센터File Exchange에서 Genomics and Next Generation Sequencing에 대해 자세히 알아보기

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질문:

2015년 12월 29일

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2016년 1월 5일

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