Unable to start the parallel computing on a linux machine
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Hi, I failed to start a parallel computing job on the linux machine. I attached the diagnose file here. Hope someone would give me some idea about how to fix it. Thank you.
Validation Details
Configuration: "local" Type: local
-------------------------------------- Stage: Find Resource
Status: Passed Description: Validation passed
Command Line Output: (none)
-------------------------------------- -------------------------------------- Stage: Distributed Job
Status: Passed Description: Validation passed
Command Line Output: (none)
-------------------------------------- -------------------------------------- Stage: Parallel Job
Status: Failed Description: The job in the given stage completed, but reported failed due to a task failure.
Command Line Output: (none)
Error Report: (none)
Debug Log: LOG FILE OUTPUT: [0] < M A T L A B (R) > [0] Copyright 1984-2010 The MathWorks, Inc. [0] Version 7.12.0.635 (R2011a) 32-bit (glnx86) [0] March 18, 2011 [3] < M A T L A B (R) > [3] Copyright 1984-2010 The MathWorks, Inc. [3] Version 7.12.0.635 (R2011a) 32-bit (glnx86) [3] March 18, 2011 [2] < M A T L A B (R) > [2] Copyright 1984-2010 The MathWorks, Inc. [2] Version 7.12.0.635 (R2011a) 32-bit (glnx86) [2] March 18, 2011 [1] < M A T L A B (R) > [1] Copyright 1984-2010 The MathWorks, Inc. [1] Version 7.12.0.635 (R2011a) 32-bit (glnx86) [1] March 18, 2011 [3] [3] To get started, type one of these: helpwin, helpdesk, or demo. [3] For product information, visit www.mathworks.com. [3] [0] [0] To get started, type one of these: helpwin, helpdesk, or demo. [0] For product information, visit www.mathworks.com. [0] [1] [1] To get started, type one of these: helpwin, helpdesk, or demo. [1] For product information, visit www.mathworks.com. [1] [2] [2] To get started, type one of these: helpwin, helpdesk, or demo. [2] For product information, visit www.mathworks.com. [2] [3]2014-02-07 19:09:19 | Error initializing MPI: Error using ==> mpiInit [3]Error opening MPI library: /export/intel/Compiler/12.0/impi/4.0.1.007/lib64/libmpich.so: cannot open shared object file: No such file or directory. [3]Error in ==> distcomp_evaluate_filetask>iSetup at 309 [3] mpiInit; [3]Error in ==> distcomp_evaluate_filetask at 26 [3] runprop = iSetup(handlers, varargin); [0]2014-02-07 19:09:19 | Error initializing MPI: Error using ==> mpiInit [0]Error opening MPI library: /export/intel/Compiler/12.0/impi/4.0.1.007/lib64/libmpich.so: cannot open shared object file: No such file or directory. [0]Error in ==> distcomp_evaluate_filetask>iSetup at 309 [0] mpiInit; [0]Error in ==> distcomp_evaluate_filetask at 26 [0] runprop = iSetup(handlers, varargin); [1]2014-02-07 19:09:20 | Error initializing MPI: Error using ==> mpiInit [1]Error opening MPI library: /export/intel/Compiler/12.0/impi/4.0.1.007/lib64/libmpich.so: cannot open shared object file: No such file or directory. [1]Error in ==> distcomp_evaluate_filetask>iSetup at 309 [1] mpiInit; [1]Error in ==> distcomp_evaluate_filetask at 26 [1] runprop = iSetup(handlers, varargin); [2]2014-02-07 19:09:20 | Error initializing MPI: Error using ==> mpiInit [2]Error opening MPI library: /export/intel/Compiler/12.0/impi/4.0.1.007/lib64/libmpich.so: cannot open shared object file: No such file or directory. [2]Error in ==> distcomp_evaluate_filetask>iSetup at 309 [2] mpiInit; [2]Error in ==> distcomp_evaluate_filetask at 26 [2] runprop = iSetup(handlers, varargin);
-------------------------------------- -------------------------------------- Stage: Matlabpool
Status: Skipped Description: Validation section skipped due to previous failure
Command Line Output: (none)
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답변 (1개)
Edric Ellis
2014년 2월 10일
It looks like you have an 'mpiLibConf.m' on your path that is trying to pick up Intel's MPI. This will not work with the local cluster type because it cannot be configured to use the correct mpiexec to match the MPI library. I would suggest removing the 'mpiLibConf.m' and trying again.
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