답변 있음 strange error in Simbiology
From looking at the Java error log, I suspect it's a bug and/or memory leak in Java's handling of zip files. I'm still trying to...
14년 초과 전 | 0
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답변 있음 SimBiology parameter fit
sbionlinfit uses a local optimization routine that does not support parameter bounds. Even fmincon, which does support parameter...
답변 있음 sbiosimulate with events
Hi Omar,
Are there any other obvious difference in the simulations? If the model appears to be the same in both cases, then p...
답변 있음 get initial amounts of some species
As of R2011a, you can use sbioparamestim to estimate the initial amount of a species. If you can't easily upgrade to R2011a, you...
답변 있음 SBML import in Matlab
Hi Razvan,
The problem is that three species in the file (Gpr1Glucout, Gpa2a, and Gpa2aKrh) have a negative concentration, whic...
거의 15년 전 | 0
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답변 있음 Fluctuations in Simbiology
Hi Razvan,
I think the answer will ultimately depend on what you know about the fluctuations and what sort of questions you'r...
답변 있음 Parameter estimation with more data sets
Hi Razvan,
Here's additional information on how you can fit simulations to the same data set using lsqnonlin. You can also fi...
대략 15년 전 | 0
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답변 있음 Parameter estimation with more data sets
Hi Razvan,
sbioparamestim only allows you to estimate one set of parameters using one set of data. I think the easiest way to...
대략 15년 전 | 0
답변 있음 Accessing a simbiology class
Hi Omar,
In the code you typed above, "msp" should be a vector of species objects that you can index using "msp(1)", "msp(2)"...
대략 15년 전 | 0
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답변 있음 Problems with a simbiology model
Question 1: First, a little background. In SimBiology, parameters can be associated either with a model (sometimes called "model...