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Programmatic Searching with PubChem - Vancomycin Example

version 1.2 (29.7 KB) by Vincent Scalfani
PubChem reproducible searching: collect literature references associated with Vancomycin synthesis in PubChem patent and PubMed literature.


Updated 22 Jul 2018

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This live script uses the PubChem SDQ query language (experimental, not fully supported yet) to retrieve literature associated with the synthesis of Vancomycin. I first search PubChem patent collection for patents containing "vancomycin" and "preparation" in the title. And in the second search, I query the PubChem PubMed collection with the mesh heading "vancomycin" and mesh subheading "chemical synthesis".

Cite As

Vincent Scalfani (2020). Programmatic Searching with PubChem - Vancomycin Example (, MATLAB Central File Exchange. Retrieved .

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MATLAB Release Compatibility
Created with R2018a
Compatible with any release
Platform Compatibility
Windows macOS Linux

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