Can we upload directly a Matlab Script file to arduino for permanent usage

Hello Sir! I have written this script in matlab that use Matlab Supporter Package for Arduino

a = arduino();
s=serial(a.Port);
fopen(s);
fprintf(s,'a');
d='b';
while d~='a'
d = fread(s,1,'uchar');
end

also I have this simple serial communication program of Arduino IDE

void setup() {
Serial.begin(9600);
Serial.println('a');
char a = 'b';
while(a!='a')
{
a = Serial.read();
}
}
void loop() {
}

But Matlab run command cant upload the way like arduino IDE uploads permanently...... Kindly tell me how can i upload program to arduino using matlab for permanent use......